.. TumorSim documentation master file, created by
   sphinx-quickstart on Tue Sep 26 15:41:19 2017.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to TumorSim's documentation!
====================================

.. automodule:: mutation_orchestrator
 
.. autoclass:: Mutation_Orchestrator
    :members:

.. automodule:: mutation_tracker
 
.. autoclass:: Mutation_Tracker
    :members:

.. automodule:: mutation_creator
 
.. autoclass:: Mutation_Creator
    :members:

.. automodule:: simulate_endToEnd
    :members:

.. toctree::
   :maxdepth: 2
   :caption: Contents:
   

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`